Closures of moment expansion of anisotropic active Brownian particles
Timothée Gautry, Maxime Deforet, Pierre Illien
article · 2026 · Journal of Statistical Mechanics: Theory and Experiment
Bacterial Glass Transition
Martin Maliet, Nicolas Fix-Boulier, Ludovic Berthier, Maxime Deforet
article · 2025 · arXiv
Experimental and theoretical approaches reveal that antimicrobial blue light killing efficiency decreases with biofilm growth in a Pseudomonas aeruginosa model
Giacomo Insero, Nidia Maldonado-Carmona, Thomas Panier, Giovanni Romano, Nelly Henry
article · 2025 · BioRxiv
· 10.1101/2025.02.26.636652
Cooperative nutrient scavenging is an evolutionary advantage in cancer
Gizem Guzelsoy, Setiembre D Elorza, Manon Ros, Logan T Schachtner, Makiko Hayashi, Spencer Hobson-Gutierrez, Parker Rundstrom, Julia S. Brunner, Ray Pillai, William E. Walkowicz, Lydia W. S. Finley, Maxime Deforet, Thales Papagiannakopoulos, Carlos Carmona-Fontaine
article · 2025 · Nature
DiSTNet2D: Leveraging Long-Range Temporal Information for Efficient Segmentation and Tracking
Jean Ollion, Martin Maliet, Caroline Giuglaris, Elise Vacher, Maxime Deforet
article · 2024 · PRX Life, 2
· 10.1103/PRXLife.2.023004
Direct comparison of spatial transcriptional heterogeneity across diverse Bacillus subtilis biofilm communities
Yasmine Dergham, Dominique Le Coq, Pierre Nicolas, Elena Bidnenko, Sandra Dérozier, Maxime Deforet, Eugénie Huillet, Pilar Sanchez-Vizuete, Julien Deschamps, Kassem Hamze, Romain Briandet
article · 2023 · Nature communications
· 10.1038/s41467-023-43386-w
Multisite transformation in Neisseria gonorrhoeae: insights on transformations mechanisms and new genetic modification protocols
Vui Yin Mafer Seow, Olga Tsygelnytska, Nicolas Biais
article · 2023 · Frontiers in Microbiology, 14
· 10.3389/fmicb.2023.1178128
Emergence of Exopolysaccharides Overproducers Is Linked to Environmental Spatial Structure via Redox State
Maxime Ardré, Maxime Deforet
article · 2023 · mSphere
· 10.1128/msphere.00123-23
Long-range alteration of the physical environment mediates cooperation between Pseudomonas aeruginosa swarming colonies
Maxime Deforet
article · 2023 · Environmental Microbiology
· 10.1111/1462-2920.16373
Flagellar Motility During E. coli Biofilm Formation Provides a Competitive Disadvantage Which Recedes in the Presence of Co-Colonizers
Wafa Benyoussef, Maxime Deforet, Amaury Monmeyran, Nelly Henry
article · 2022 · Front Cell Infect Microbiol, 12, 896898
· 10.3389/fcimb.2022.896898
Spatial-temporal dynamics of a microbial cooperative behavior resistant to cheating
Hilary Monaco, Kevin S Liu, Tiago Sereno, Maxime Deforet, Bradford P Taylor, Yanyan Chen, Caleb C Reagor, Joao B Xavier
article · 2022 · Nature communications, 13, 1-11
· 10.1038/s41467-022-28321-9
An In Vitro Model System to Test Mechano-Microbiological Interactions Between Bacteria and Host Cells
Luis Carlos Santos, Emilia Laura Munteanu, Nicolas Biais
chapter · 2021
· 10.1007/978-1-0716-1661-1_11
Cooperation between melanoma cell states promotes metastasis through heterotypic cluster formation
Nathaniel R. Campbell, Anjali Rao, Miranda V. Hunter, Magdalena K. Sznurkowska, Luzia Briker, Maomao Zhang, Maayan Baron, Silja Heilmann, Maxime Deforet, Colin Kenny, Lorenza Ferretti, Ting-Hsiang Huang, Sarah Perlee, Manik Garg, Jérémie Nsengimana, Massimo Saini, Emily Montal, Mohita Tagore, Julia Newton-Bishop, Mark R. Middleton, Pippa Corrie, David J. Adams, Roy Rabbie, Nicola Aceto, Mitchell P. Levesque, Robert A. Cornell, Itai Yanai, Joao B. Xavier, Richard M. White
article · 2021 · Developmental Cell, 56, 2808-2825
· 10.1016/j.devcel.2021.08.018
Fresh Extension of Vibrio cholerae Competence Type IV Pili Predisposes Them for Motor-Independent Retraction
Jennifer L Chlebek, Triana N Dalia, Nicolas Biais, Ankur B Dalia
article · 2021 · Applied and Environmental Microbiology, 87
· 10.1128/AEM.00478-21
Open science saves lives: lessons from the COVID-19 pandemic
Lonni Besancon, Nathan Peiffer-Smadja, Corentin Segalas, Haiting Jiang, Paola Masuzzo, Cooper Smout, Eric Billy, Maxime Deforet, Clemence Leyrat
article · 2021 · BMC MEDICAL RESEARCH METHODOLOGY, 21
· 10.1186/s12874-021-01304-y
Four species of bacteria deterministically assemble to form a stable biofilm in a millifluidic channel
Amaury Monmeyran, Wafa Benyoussef, Philippe Thomen, Narimane Dahmane, Aurélie Baliarda, Matthieu Jules, S Aymerich, Nelly Henry
article · 2021 · NPJ Biofilms Microbiomes, 7, 64
· 10.1038/s41522-021-00233-4
Spatiotemporal pattern formation in E. coli biofilms explained by a simple physical energy balance
Philippe Thomen, Jules Valentin, Anne-Florence Bitbol, Nelly Henry
article · 2020 · Soft Matter, 16, 494-504
· 10.1039/c9sm01375j
Evolution at the edge of expanding populations
Maxime Deforet, Carlos Carmona-Fontaine, Kirill S Korolev, Joao B Xavier
article · 2019 · The American Naturalist, 194, 291--305
Environmentally Mediated Social Dilemmas
Sylvie Estrela, Eric Libby, Jeremy Van Cleve, Florence Débarre, Maxime Deforet, William R. Harcombe, Jorge Peña, Sam P. Brown, Michael E. Hochberg
article · 2018 · Trends in Ecology and Evolution, 34, 6-18
· 10.1016/j.tree.2018.10.004
The inducible chemical-genetic fluorescent marker FAST outperforms classical fluorescent proteins in the quantitative reporting of bacterial biofilm dynamics
Amaury Monmeyran, Philippe Thomen, Hugo Jonquiere, Franck Sureau, Chenge Li, Marie-Aude Plamont, Carine Douarche, Jean-François Casella, Arnaud Gautier, Nelly Henry
article · 2018 · Scientific Reports, 8, 10336
· 10.1038/s41598-018-28643-z
Intermittent Pili-Mediated Forces Fluidize Neisseria meningitidis Aggregates Promoting Vascular Colonization
Daria Bonazzi, Valentina Lo Schiavo, Silke Machata, Ilyas Djafer-Cherif, Pierre Nivoit, Valeria Manriquez, Hirokazu Tanimoto, Julien Husson, Nelly Henry, Hugues Chate, Raphael Voituriez, Guillaume Dumenil
article · 2018 · Cell, 174
· 10.1016/j.cell.2018.04.010
Archaeal cells share common size control with bacteria despite noisier growth and division
Ye-Jin Eun, Po-Yi Ho, Minjeong Kim, Salvatore LaRussa, Lydia Robert, Lars Renner, Amy Schmid, Ethan Garner, Ariel Amir
article · 2018 · Nature Microbiology, 3, 148-154
· 10.1038/s41564-017-0082-6
Method for Detecting and Studying Genome-Wide Mutations in Single Living Cells in Real Time
Marina Elez, Lydia Robert, Ivan Matic
article · 2018 · Methods Mol Biol, 1736
· 10.1007/978-1-4939-7638-6_3
Bacterial biofilm under flow: First a physical struggle to stay, then a matter of breathing
Philippe Thomen, Jérôme Robert, Amaury Monmeyran, Anne-Florence Bitbol, Carine Douarche, Nelly Henry
article · 2017 · PLOS ONE, 12, 1-24
· 10.1371/journal.pone.0175197
Single-cell analysis of growth in budding yeast and bacteria reveals a common size regulation strategy
Ilya Soifer, Lydia Robert, Ariel Amir
article · 2016 · Current Biology, 26, 356-61
· 10.1016/j.cub.2015.11.067
Single-Cell Analysis of Growth and Cell Division of the Anaerobe Desulfovibrio vulgaris Hildenborough
A Fievet, A Ducret, T Mignot, O Valette, L Robert, R Pardoux, AR Dolla, C Aubert
article · 2015 · Frontiers in Microbiology, 6, 1378
· 10.3389/fmicb.2015.01378
Size sensors in bacteria, cell cycle control, and size control
Lydia Robert
article · 2015 · Frontiers in Microbiology, 6, 515
· 10.3389/fmicb.2015.00515
Statistical estimation of a growth-fragmentation model observed on a genealogical tree
Marie Doumic, Marc Hoffmann, Nathalie Krell, Lydia Robert
article · 2015 · Bernoulli, 21, 1760-1799
· 10.3150/14-BEJ623
Division in Escherichia coli is triggered by a size-sensing rather than a timing mechanism
L Robert, M Hoffmann, N Krell, S Aymerich, M Doumic
article · 2014 · BMC Biology
· 10.1186/1741-7007-12-17